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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015833825.1_cds_XP_016505409.1_18752
CDS Infomation

[gene=LOC107823297] [db_xref=GeneID:107823297] [protein=probable inactive shikimate kinase like 2, chloroplastic] [protein_id=XP_016505409.1] [location=join(280165..280386,281206..281393,281472..281666,282122..282183,282517..282583,282666..282784,283719..283895,284280..284389)] [gbkey=CDS]
Sequence

ATGGCTTCTTCTTCAGCAGCTCTCTGTTTTCTTTCTCCAAATCCCATTAAAGTTTCACTA
TCATTTCCAAAGAGTTTTTCTTGTTCTTCAAAACCTACATTCCCAGCAACTGCAAGCTTT
TATTCAGCAATTCCTCGTTTAAGTTACAGCAACTTCAAGAAACTCAATGCCCTTCACTGC
AGCAATCTTCCTACTGCTTCCACAAATAACACTCAGTACGAGTTTTGTGATGGCTCTTCT
GAGGTGGAGTTGAGATTAGAACTTGGGCAGGGAGATGTAACTCCTAAGGAGATATATGTA
GATGCAAATGAAAGTTCTTTAGCAATTAGAGTAGAGCAATCTGGAATTATTCGGACTCTC
ATGGAAACCAGCACTCTGTATGAGAAGATAAAGCCTGCAGAGACAATATGGTACATAGAC
GACGATCAATTAGTAATTAGCTTGAAGAAGCAAAACTCTGAGTTGAAATGGCCTGACATT
GTGGAGTCTTGGGAGTCCCTAAGTGCTGGAATTACACAACTCCTTAGAGGAACTTCAATA
TACTTAGTTGGGGAATCGACTGAAATCAACCAGAGGATTGCTCGAGAACTGGCTGTTGGA
CTAGGGTACACCCCTCTTAGTACTATGGAGCTGCTAGAAGTATATGCCAAGCAACCAATT
GATTCATGGGTAAATGAGGAGGGGTCTGATGCTGTAGCAGAAGCAGAAAGTGTTATACTA
GAGAGTCTCAGTAGCCATGCCCGTGCTGTTATTGCAACCTTGGGAGGGAAGAGAGGTGCC
GCTGGAAGAGCAAACCAATGGAGGCATCTTTTTGCTGGATTCACAGTCTGGCTTTCCCTA
TCTGAAGCCACAGATGAAGAATCTGCAAAAGAGGAAGCAAAAAGGAACATGCAAGATAGT
GGTCGAGGTTATCCTAATGCTGAAGTGGTAGTAAAGCTCGGAGGTTGGGACCCTAACTAT
TCAAAGTCAGTAGCTCAGGCTGTGCTTAGTGCACTTAAGTGCTTAATTTTGGCAGATAAA
GACCTTCCAGGAAAAAAGAGTTTATACATCAGGTTGGGCTGCAGAGGTGATTGGCCAGAC
ATCAAACCACCCGGTTGGGACCCGTCAAGCAGCCCTGATGTATCTTCTCCCTCCTCATAG

Peptide Sequence

PEP ID

XP_016505409.1
PEP Infomation

PREDICTED: probable inactive shikimate kinase like 2, chloroplastic [Nicotiana tabacum]
Sequence

MASSSAALCFLSPNPIKVSLSFPKSFSCSSKPTFPATASFYSAIPRLSYSNFKKLNALHC
SNLPTASTNNTQYEFCDGSSEVELRLELGQGDVTPKEIYVDANESSLAIRVEQSGIIRTL
METSTLYEKIKPAETIWYIDDDQLVISLKKQNSELKWPDIVESWESLSAGITQLLRGTSI
YLVGESTEINQRIARELAVGLGYTPLSTMELLEVYAKQPIDSWVNEEGSDAVAEAESVIL
ESLSSHARAVIATLGGKRGAAGRANQWRHLFAGFTVWLSLSEATDEESAKEEAKRNMQDS
GRGYPNAEVVVKLGGWDPNYSKSVAQAVLSALKCLILADKDLPGKKSLYIRLGCRGDWPD
IKPPGWDPSSSPDVSSPSS

Transcript Sequence

Gene sequence data has not been registered.